Improving Health & Medicine

Right Off the Bat: Navigation in Extra-Large Spaces

Bats navigating in an innovative extra-large experimental setup reveal a previously unknown neuronal code

• TAGS: Senses, Brain

The Bat-Tunnel: A Unique Setup for the Study of the Neural Basis of Navigation

 

REHOVOT, ISRAEL—May 27, 2021—The brain is often likened to a computer: neurons organized in complex circuits serving as its hardware; its software a plethora of codes that govern the neurons’ behavior. But sometimes the brain performs exceptionally well even when its hardware seems inadequate for the task; for example, the puzzle of how we and other mammals manage to navigate large-scale environments even though the brain’s spatial perception circuits are seemingly suited to representing much smaller areas. A team of researchers from the Weizmann Institute of Science, led by Prof. Nachum Ulanovsky of the Department of Neurobiology, tackled this riddle by thinking outside the experimental box. By combining an unusual research model – fruit bats – with an unusual setting – a 200-meter-long (about one-eighth of a mile) Bat-Tunnel – the team successfully revealed a novel neuronal code for spatial perception. The finding was reported in Science.

 

Bat Tunnel 0

The Bat-Tunnel on the Weizmann Institute campus. Left: Aerial view of the 200-meter-long tunnel; right: Inside the Bat-Tunnel

 

 

“Bats and other mammals navigate very large environments in nature,” says Prof. Ulanovsky. “In one night a bat can cover an area that is about 20 kilometers [12.5 miles] long, 2 kilometers [1.25 miles] wide, and half a kilometer [0.3 mile] high. This is very different from the one-square-meter [1.3-square-foot] boxes that constitute the traditional experimental setups.” Prof. Ulanovsky and his team understood that in order to attain a closer-to-natural take on spatial perception, they had to go bigger: a difference in scale, they hypothesized, should translate to a difference in neuronal activity.

To test their hypothesis, Prof. Ulanovsky initiated the construction of a 200-meter-long Bat-Tunnel – an elongated, opaque greenhouse of sorts and the first of its kind in the world – on the Weizmann Institute campus. “Although our tunnel is not exactly 20 kilometers long, 200 meters is still considerably more than what we were able to study so far,” Prof. Ulanovsky states. Additionally, the researchers developed a miniature “neural logger” device that is mounted on the bats’ heads for recording the activity of neurons in their hippocampus – the brain region responsible for memory storage, including spatial memory – while they’re in flight. Prof. Ulanovsky and his team also installed a series of antennas, which provide more accurate location capabilities than GPS, to track the bats as they fly in the tunnel. Taken together, these elements let the researchers study their mobile subjects in a setting that better emulates their natural behavior.

Led by PhD students Tamir Eliav and Shir Maimon, along with Dr. Liora Las, an associate staff scientist working with Prof. Ulanovsky, the study’s publication date is symbolic: exactly 50 years ago this year, John O’Keefe discovered place cells, a breakthrough that earned him a Nobel Prize in Physiology or Medicine in 2014. Place cells are specialized neurons in the hippocampus, each of which was found to be activated when a lab animal enters a particular space in its environment, called the place field. A joint activation of many place cells builds up an inner map of the environment, enabling navigation. However, the work of O’Keefe and others was performed on rodents navigating in small environments, such as the one-by-one-meter box, so that the place cells could accommodate the required number of place fields, each corresponding to an area of about 10 centimeters (almost 4 inches) in diameter. If each place cell in the animal’s hippocampus indeed represents one singular small space in the environment, then bats would need about 1,013–1,015 neurons to carry out the correct computation for the span of their multi-kilometer flight routes – but their hippocampus has only about 105 neurons, and yet they still manage to navigate.

Nachum Ulanovsky
Prof. Nachum Ulanovsky. “We believe that our findings are applicable to spatial perception of very large environments across mammalian species, including humans”

Owing to their unique experimental setup, Prof. Ulanovsky and his team were able to add a significant piece to the spatial cognition puzzle. They found that when bats navigate a large environment, the behavior of the place cells shifts completely from the traditional model. First of all, it turns out that a single neuron can represent multiple place fields, rather than just one, as previously thought. On top of that, the size of each place field is not uniform and changes according to location, sometimes by a 20-fold difference. In other words, each neuron can be activated by several locations, and each represented location may differ dramatically in size (i.e., has a different resolution). This multi-field, multi-scale coding scheme can explain the discrepancy in the traditional model wherein more neurons are required for computing navigation than there actually are in the hippocampus. Interestingly, the same type of code was found from the very first day of the bats’ exposure to the tunnel, and in both wild-born and lab-born bats, thus attesting to the robustness of the multi-field, multi-scale representation of space.

 

Egyptian Fruit Bat
Egyptian fruit bats. Unusual model animals

 

To expand further on their empirical findings, Prof. Ulanovsky collaborated with theoreticians Prof. Misha Tsodyks, a departmental colleague at the Weizmann Institute, and Dr. Johnatan Aljadeff, a former postdoctoral fellow at Weizmann and now an assistant professor at the University of California in San Diego, to create a computerized simulation of the newly discovered code. By comparing this code to the traditional model, the scientists found that while in smaller environments there is no significant difference between the two in terms of the system’s accuracy, the new code is far more efficient in larger environments, and the system performs fewer location errors. Further analysis by PhD student Gily Ginosar provided insight into why the multi-field multi-scale code is observed in large environments but not in small ones.

“Additional theoretical modeling supplied a potential mechanistic explanation as to how and where this code is formed in the mammalian hippocampus,” Prof. Ulanovsky says. “We believe that our findings are applicable to spatial perception of very large environments across mammalian species, including humans.”

Prof. Nachum Ulanovsky is the incumbent of the Barbara and Morris L. Levinson Professorial Chair in Brain Research. His research is supported by Dita & Yehuda L. Bronicki; the European Research Council; and the DFG-SFB.

Improving Health & Medicine

Right Off the Bat: Navigation in Extra-Large Spaces

Bats navigating in an innovative extra-large experimental setup reveal a previously unknown neuronal code

• TAGS: Senses , Brain

The Bat-Tunnel: A Unique Setup for the Study of the Neural Basis of Navigation

 

REHOVOT, ISRAEL—May 27, 2021—The brain is often likened to a computer: neurons organized in complex circuits serving as its hardware; its software a plethora of codes that govern the neurons’ behavior. But sometimes the brain performs exceptionally well even when its hardware seems inadequate for the task; for example, the puzzle of how we and other mammals manage to navigate large-scale environments even though the brain’s spatial perception circuits are seemingly suited to representing much smaller areas. A team of researchers from the Weizmann Institute of Science, led by Prof. Nachum Ulanovsky of the Department of Neurobiology, tackled this riddle by thinking outside the experimental box. By combining an unusual research model – fruit bats – with an unusual setting – a 200-meter-long (about one-eighth of a mile) Bat-Tunnel – the team successfully revealed a novel neuronal code for spatial perception. The finding was reported in Science.

 

Bat Tunnel 0

The Bat-Tunnel on the Weizmann Institute campus. Left: Aerial view of the 200-meter-long tunnel; right: Inside the Bat-Tunnel

 

 

“Bats and other mammals navigate very large environments in nature,” says Prof. Ulanovsky. “In one night a bat can cover an area that is about 20 kilometers [12.5 miles] long, 2 kilometers [1.25 miles] wide, and half a kilometer [0.3 mile] high. This is very different from the one-square-meter [1.3-square-foot] boxes that constitute the traditional experimental setups.” Prof. Ulanovsky and his team understood that in order to attain a closer-to-natural take on spatial perception, they had to go bigger: a difference in scale, they hypothesized, should translate to a difference in neuronal activity.

To test their hypothesis, Prof. Ulanovsky initiated the construction of a 200-meter-long Bat-Tunnel – an elongated, opaque greenhouse of sorts and the first of its kind in the world – on the Weizmann Institute campus. “Although our tunnel is not exactly 20 kilometers long, 200 meters is still considerably more than what we were able to study so far,” Prof. Ulanovsky states. Additionally, the researchers developed a miniature “neural logger” device that is mounted on the bats’ heads for recording the activity of neurons in their hippocampus – the brain region responsible for memory storage, including spatial memory – while they’re in flight. Prof. Ulanovsky and his team also installed a series of antennas, which provide more accurate location capabilities than GPS, to track the bats as they fly in the tunnel. Taken together, these elements let the researchers study their mobile subjects in a setting that better emulates their natural behavior.

Led by PhD students Tamir Eliav and Shir Maimon, along with Dr. Liora Las, an associate staff scientist working with Prof. Ulanovsky, the study’s publication date is symbolic: exactly 50 years ago this year, John O’Keefe discovered place cells, a breakthrough that earned him a Nobel Prize in Physiology or Medicine in 2014. Place cells are specialized neurons in the hippocampus, each of which was found to be activated when a lab animal enters a particular space in its environment, called the place field. A joint activation of many place cells builds up an inner map of the environment, enabling navigation. However, the work of O’Keefe and others was performed on rodents navigating in small environments, such as the one-by-one-meter box, so that the place cells could accommodate the required number of place fields, each corresponding to an area of about 10 centimeters (almost 4 inches) in diameter. If each place cell in the animal’s hippocampus indeed represents one singular small space in the environment, then bats would need about 1,013–1,015 neurons to carry out the correct computation for the span of their multi-kilometer flight routes – but their hippocampus has only about 105 neurons, and yet they still manage to navigate.

Nachum Ulanovsky
Prof. Nachum Ulanovsky. “We believe that our findings are applicable to spatial perception of very large environments across mammalian species, including humans”

Owing to their unique experimental setup, Prof. Ulanovsky and his team were able to add a significant piece to the spatial cognition puzzle. They found that when bats navigate a large environment, the behavior of the place cells shifts completely from the traditional model. First of all, it turns out that a single neuron can represent multiple place fields, rather than just one, as previously thought. On top of that, the size of each place field is not uniform and changes according to location, sometimes by a 20-fold difference. In other words, each neuron can be activated by several locations, and each represented location may differ dramatically in size (i.e., has a different resolution). This multi-field, multi-scale coding scheme can explain the discrepancy in the traditional model wherein more neurons are required for computing navigation than there actually are in the hippocampus. Interestingly, the same type of code was found from the very first day of the bats’ exposure to the tunnel, and in both wild-born and lab-born bats, thus attesting to the robustness of the multi-field, multi-scale representation of space.

 

Egyptian Fruit Bat
Egyptian fruit bats. Unusual model animals

 

To expand further on their empirical findings, Prof. Ulanovsky collaborated with theoreticians Prof. Misha Tsodyks, a departmental colleague at the Weizmann Institute, and Dr. Johnatan Aljadeff, a former postdoctoral fellow at Weizmann and now an assistant professor at the University of California in San Diego, to create a computerized simulation of the newly discovered code. By comparing this code to the traditional model, the scientists found that while in smaller environments there is no significant difference between the two in terms of the system’s accuracy, the new code is far more efficient in larger environments, and the system performs fewer location errors. Further analysis by PhD student Gily Ginosar provided insight into why the multi-field multi-scale code is observed in large environments but not in small ones.

“Additional theoretical modeling supplied a potential mechanistic explanation as to how and where this code is formed in the mammalian hippocampus,” Prof. Ulanovsky says. “We believe that our findings are applicable to spatial perception of very large environments across mammalian species, including humans.”

Prof. Nachum Ulanovsky is the incumbent of the Barbara and Morris L. Levinson Professorial Chair in Brain Research. His research is supported by Dita & Yehuda L. Bronicki; the European Research Council; and the DFG-SFB.